PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00094g07015.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family HD-ZIP
Protein Properties Length: 298aa    MW: 33256.4 Da    PI: 6.9331
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00094g07015.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.22.9e-18128182256
                               T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                  Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                               rk+ +++keq  +Lee F+++++++ +++  L+k+l+L  rqV vWFqNrRa+ k
  Peinf101Scf00094g07015.1 128 RKKLRLSKEQAAVLEETFKEHNTLNPKQKLALSKQLNLRPRQVEVWFQNRRARTK 182
                               788899***********************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575119No hitNo description
PfamPF046181.7E-184104IPR006712HD-ZIP protein, N-terminal
Gene3DG3DSA:1.10.10.603.1E-17124187IPR009057Homeodomain-like
PROSITE profilePS5007116.925124184IPR001356Homeobox domain
SMARTSM003896.6E-15126188IPR001356Homeobox domain
SuperFamilySSF466895.56E-18127193IPR009057Homeodomain-like
PfamPF000469.9E-16128182IPR001356Homeobox domain
CDDcd000861.20E-14128185No hitNo description
PROSITE patternPS000270159182IPR017970Homeobox, conserved site
SMARTSM003401.2E-25184227IPR003106Leucine zipper, homeobox-associated
PfamPF021835.3E-11184218IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MGNEKEDGLG LSLSLGMSCP QNNLKNELTL STTPSLSLNL LPFMHHHQIS AERNEEARDN  60
VRGEIDMNQA ARIIECDEEL EDHQVIMVSS PNSTVSSVSG KRSHEREENE GERATSSLED  120
DGGDAAARKK LRLSKEQAAV LEETFKEHNT LNPKQKLALS KQLNLRPRQV EVWFQNRRAR  180
TKLKQTEVDC EYLRRCCENL TEENRRLQKE VNELRALKLS PQMYMNMSPP TTLTMCPQCE  240
RVAVSSSSSS AASSSAVTGA SVSRSNHPIG ALHQPPTPLK PWAALLSSKT LDVQRSQL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1176184RRARTKLKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009619639.11e-175PREDICTED: homeobox-leucine zipper protein HAT3-like
RefseqXP_016462220.11e-175PREDICTED: homeobox-leucine zipper protein HAT3-like
SwissprotP466024e-86HAT3_ARATH; Homeobox-leucine zipper protein HAT3
TrEMBLQ424371e-154Q42437_SOLLC; HD-ZIP protein
STRINGSolyc01g090460.2.11e-154(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA11182485
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60390.14e-79homeobox-leucine zipper protein 3